Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Proportion of different classes of compounds for the metabolites detected from jalapeño and serrano chile peppers using a widely targeted metabolomics approach.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques:

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Top 10 most highly upregulated and downregulated metabolites.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques:

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Top 10 differentially expressed upregulated metabolites with KEGG database annotation.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques: Phospho-proteomics

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Summary of the different functions annotated for the differentially expressed metabolites (DEMs) using the KEGG database. Annotations revealed that the majority of the DEMs are involved in metabolic pathways and in the biosynthesis of secondary metabolites and cofactors. Note: A DEM can have multiple annotated functions.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques:

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Rich factor (RF) values for the differentially expressed metabolites with annotated functions on the KEGG database. RF is the ratio of the number of differentially expressed metabolites in a pathway to the total number of metabolites annotated in the same pathway (RF for a pathway = no. of differentially expressed metabolites/total number of metabolites). Terpenoid backbone biosynthesis had significant enrichments, with an RF value of 1.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques:

Journal: Frontiers in Plant Science

Article Title: Intercropping of tobacco and maize at seedling stage promotes crop growth through manipulating rhizosphere microenvironment

doi: 10.3389/fpls.2024.1470229

Figure Lengend Snippet: Changes of different metabolites in rhizosphere soil. (A) Classification of identified metabolites in rhizosphere soils; (B) Venn maps of differential metabolites in rhizosphere soils of tobacco and maize under mono-cropping and intercropping systems; (C) Volcanic maps of differentiated metabolites in maize rhizosphere soil (YC vs KYI); (D) Volcanic maps of differentiated metabolites in maize rhizosphere soil (KT vs KYI). The panels (C, D) are drawn based on the average of three repetitions.

Article Snippet: Orthogonal partial least squares discriminant analysis (OPLS-DA) was used to analyze the rhizosphere soil metabolites using the Metware platform ( https://cloud.metware.cn ).

Techniques:

Journal: Frontiers in Plant Science

Article Title: Intercropping of tobacco and maize at seedling stage promotes crop growth through manipulating rhizosphere microenvironment

doi: 10.3389/fpls.2024.1470229

Figure Lengend Snippet: Comparative analysis of metabolites from KEGG enrichment pathway (TOP20) and major pathway of differential metabolites. (A) Differential metabolite enrichment pathway between YC and KYI; (B) Differential metabolite enrichment pathway between KT and KYI; (C) Comparison of major KEGG pathway differential metabolites abundance between intertreatment and single treatment, with blue indicating low content and red indicating high content.

Article Snippet: Orthogonal partial least squares discriminant analysis (OPLS-DA) was used to analyze the rhizosphere soil metabolites using the Metware platform ( https://cloud.metware.cn ).

Techniques: Comparison

Journal: Frontiers in Plant Science

Article Title: Intercropping of tobacco and maize at seedling stage promotes crop growth through manipulating rhizosphere microenvironment

doi: 10.3389/fpls.2024.1470229

Figure Lengend Snippet: Combine analysis. (A) Redundancy analysis of soil bacteria and soil environmental indicators; (B) Redundancy analysis of soil fungi and soil environmental indicators; (C) Correlation analysis between key metabolites and the abundance of dominant bacteria; (D) Correlation analysis of key metabolites with the abundance of dominant fungi. * means p ≤ 0.05, ** means p ≤ 0.01, *** means p ≤ 0.001.

Article Snippet: Orthogonal partial least squares discriminant analysis (OPLS-DA) was used to analyze the rhizosphere soil metabolites using the Metware platform ( https://cloud.metware.cn ).

Techniques: Bacteria